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GWAS-related eQTLs across different cancer types

We identified 337,131 eQTLs that overlap with GWAS linkage disequilibrium (LD) regions (r² ≥ 0.5).



e.g., "STAD"
e.g., "r²>= 0.8"
e.g., "rs2273"
Cancer type
eQTL type
tagSNP
LD
SNP ID
SNP position (hg19)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-value
GWAS-Traits
BLCA cis rs6087771 1 rs6058468 chr20:30406448 COX4I2 chr20:30225691-30232800:+ 0.2 4.21 3.25E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060599 chr20:30257754 COX4I2 chr20:30225691-30232800:+ 0.22 4.6 5.73E-6 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060621 chr20:30261562 COX4I2 chr20:30225691-30232800:+ 0.22 4.58 6.2E-6 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060716 chr20:30274847 COX4I2 chr20:30225691-30232800:+ 0.21 4.41 1.35E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060857 chr20:30300222 COX4I2 chr20:30225691-30232800:+ 0.22 4.59 6.11E-6 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060915 chr20:30330306 COX4I2 chr20:30225691-30232800:+ 0.2 4.27 2.46E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060919 chr20:30331922 COX4I2 chr20:30225691-30232800:+ 0.2 4.17 3.83E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060922 chr20:30333909 COX4I2 chr20:30225691-30232800:+ 0.2 4.17 3.83E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060932 chr20:30350545 COX4I2 chr20:30225691-30232800:+ 0.2 4.18 3.54E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060933 chr20:30351903 COX4I2 chr20:30225691-30232800:+ 0.2 4.29 2.3E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060944 chr20:30372114 COX4I2 chr20:30225691-30232800:+ 0.2 4.23 2.97E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060950 chr20:30378031 COX4I2 chr20:30225691-30232800:+ 0.2 4.23 2.93E-5 Subcortical brain region volumes
BLCA cis rs6087771 1 rs6060962 chr20:30397847 COX4I2 chr20:30225691-30232800:+ 0.2 4.25 2.68E-5 Subcortical brain region volumes
BLCA cis rs2243480 1 rs60683927 chr7:65394768 CCT6P1 chr7:65216092-65228661:+ 0.31 4.38 1.53E-5 Diabetic kidney disease
BLCA cis rs2143950 1 rs60693825 chr14:35514456 PPP2R3C chr14:35554679-35591679:- 0.25 3.93 9.92E-5 Atopic dermatitis